Escherichia coli O111:NM strain FWSEC0005

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O111:NM strain FWSEC0005 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which grants it mobility. This strain is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. It is typically found in host-associated habitats, reflecting its relationship with various hosts. The optimal growth temperature for E. coli O111:NM FWSEC0005 is 37°C, placing it within the mesophilic temperature range. This preference for moderate temperatures is consistent with many enteric bacteria that inhabit warm-blooded animals. The organism is noted for having a single replicon and two membranes, which is characteristic of Gram-negative bacteria. In terms of its ecological role, E. coli O111:NM FWSEC0005 is described as free-living, suggesting it can survive independently in the environment, potentially contributing to nutrient cycling and microbial diversity in its specific habitat. The combination of its mobility, metabolic flexibility, and association with hosts suggests that this strain may play a significant role in the intestinal microbiota of animals and humans, influencing health and disease dynamics. The accession number for this strain is NZ_CP031912.1, allowing for further scientific inquiry and reference.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO111:NM strain FWSEC0005

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O111:NM strain FWSEC0005
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O111:NM strain FWSEC0005 chromosome, complete

Gene Summary

Adenine Count

1262425 bp

Thymine Count

1270978 bp

Guanine Count

1309809 bp

Cytosine Count

1289542 bp

Genome Length

5132754 bp

Protein-coding Genes

4487 genes

Non-Coding Genes

659 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
solute:sodium symporter family transporterCCU03_RS00115Not AvailablePositive23616 - 2533162130.8
sulfatase-like hydrolase/transferaseCCU03_RS00120Not AvailablePositive25328 - 2682157269.4
protein yidiCCU03_RS00125Not AvailableNegative26868 - 2731715730.8
yidh family proteinCCU03_RS00130Not AvailablePositive27427 - 2777412780.1
duf202 domain-containing proteinCCU03_RS00135Not AvailablePositive27764 - 2812613769.1
radical sam proteinCCU03_RS00140Not AvailablePositive28123 - 2862019242.0
multidrug efflux mfs transporter emrdCCU03_RS00145Not AvailableNegative28628 - 2981242218.5
protein ysdeCCU03_RS26005Not AvailablePositive29894 - 299682827.45
type i toxin-antitoxin system toxin tisbCCU03_RS00150Not AvailableNegative30231 - 303203195.29
ilvb operon leader peptide ivblCCU03_RS00155Not AvailablePositive30885 - 309833256.17

Displaying genes 631 – 640 of 5146 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.