Escherichia coli O121:H19 strain FWSEC0006

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O121:H19 strain FWSEC0006 is a Gram-negative bacterium characterized by its rod shape and facultative anaerobic metabolism. This strain is capable of mobility due to the presence of flagella, and it typically exists in pairs or as singles. As a mesophilic organism, its optimal growth temperature is around 37°C, aligning with the typical body temperature of warm-blooded hosts. The strain has a single replicon and is surrounded by two membranes, which is characteristic of Gram-negative bacteria. E. coli O121:H19 FWSEC0006 is noted for its free-living biotic relationship, indicating its ability to thrive in various environments, particularly those associated with hosts. The strain is cataloged under accession NZ_CP031910.1, providing a reference for further research and identification. The traits of this strain highlight its adaptability and potential ecological roles, particularly in host-associated habitats, where it may interact with other microbial communities and influence various biological processes. Understanding such characteristics is crucial in studying E. coli's ecological dynamics and its implications in health and disease contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO121:H19 strain FWSEC0006

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O121:H19 strain FWSEC0006
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O121:H19 strain FWSEC0006


Gene Summary

Adenine Count

1331097 bp

Thymine Count

1331124 bp

Guanine Count

1366401 bp

Cytosine Count

1370248 bp

Genome Length

5398870 bp

Protein-coding Genes

4527 genes

Non-Coding Genes

962 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinB9X35_RS27860Not AvailableNegative895786 - 8959295263.53
duf957 domain-containing proteinB9X35_RS04530Not AvailableNegative896014 - 8962117462.76
duf5983 family proteinB9X35_RS04535Not AvailableNegative896223 - 89671118046.5
ta system toxin cbta family proteinB9X35_RS04540Not AvailableNegative896708 - 89708514033.8
type iv toxin-antitoxin system yeeu family antitoxinB9X35_RS04545Not AvailableNegative897132 - 89750613822.4
Hypothetical proteinB9X35_RS04550Not AvailableNegative897669 - 8978908411.2
jab domain-containing proteinB9X35_RS04555Not AvailableNegative897959 - 8980934769.82
Issod1, transposase orfaB9X35_RS04560Not AvailablePositive898134 - 89933143229.9
TransposaseB9X35_RS04565Not AvailableNegative899409 - 89975913118.1
Truncated transposaseB9X35_RS04570Not AvailableNegative899756 - 90018116018.2

Displaying genes 11 – 20 of 5489 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.