Escherichia coli O103:H2 strain FWSEC0007

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O103:H2 strain FWSEC0007 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism. This strain exhibits a typical arrangement of cells in pairs and singles, and it is motile due to the presence of flagella. It has an optimal growth temperature of 37°C and falls within the mesophilic temperature range. E. coli O103:H2 FWSEC0007 is associated with host organisms, indicating a biotic relationship that allows it to thrive in various environments, potentially including the gastrointestinal tracts of animals or humans. The strain possesses a single replicon and is structured with two membranes, typical of Gram-negative bacteria. This structural configuration is significant for its adaptability and interaction with its environment. The presence of flagella not only facilitates mobility but also suggests that this strain may play a role in colonization and persistence within its host, contributing to its ecological niche. As a free-living organism, E. coli O103:H2 FWSEC0007 can adapt to different habitats, which may influence its interactions with other microbial communities. This adaptability underscores the importance of understanding specific strains in the context of microbial ecology and potential pathogenicity, particularly in relation to food safety and public health. The accession number for this strain is NZ_CP031908.1, which can be used for further genomic and phenotypic studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO103:H2 strain FWSEC0007

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O103:H2 strain FWSEC0007
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O103:H2 strain FWSEC0007 chromosome, complete

Gene Summary

Adenine Count

1328267 bp

Thymine Count

1332130 bp

Guanine Count

1365179 bp

Cytosine Count

1372029 bp

Genome Length

5397605 bp

Protein-coding Genes

4637 genes

Non-Coding Genes

805 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine abc transporter permease hisqCCU04_RS08165Not AvailablePositive1638544 - 163923024634.8
abc transporter permeaseCCU04_RS08170Not AvailablePositive1639227 - 163994326871.3
histidine abc transporter atp-binding protein hispCCU04_RS08175Not AvailablePositive1639951 - 164072428626.8
recombination-promoting nuclease rpnbCCU04_RS08180Not AvailablePositive1640921 - 164181134148.4
tigr01777 family oxidoreductaseCCU04_RS08185Not AvailableNegative1641859 - 164275232700.7
dihydroneopterin triphosphate 2'-epimeraseCCU04_RS08190Not AvailableNegative1642773 - 164313514082.8
gsh-dependent disulfide bond oxidoreductaseCCU04_RS08195Not AvailableNegative1643192 - 164383924517.2
glutathione transferaseCCU04_RS08200Not AvailablePositive1643975 - 164461924327.0
phosphodiesteraseCCU04_RS08205Not AvailablePositive1644675 - 164522619992.1
nudix hydrolase yfcdCCU04_RS08210Not AvailablePositive1645284 - 164582620376.9

Displaying genes 2351 – 2360 of 5442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.