Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS23365 | Not Available | Positive | 1022613 - 1023200 | 22147.3 |
| collagenase | D0N37_RS23370 | Not Available | Negative | 1023282 - 1024415 | 41906.8 |
| hypothetical protein | D0N37_RS25240 | Not Available | Negative | 1024400 - 1024741 | 12011.6 |
| hypothetical protein | D0N37_RS25245 | Not Available | Positive | 1024980 - 1025306 | 12422.2 |
| hypothetical protein | D0N37_RS25250 | Not Available | Positive | 1025366 - 1025857 | 18858.7 |
| alanine racemase | D0N37_RS23380 | Not Available | Negative | 1025901 - 1027022 | 40365.5 |
| dihydroneopterin triphosphate diphosphatase | D0N37_RS23385 | Not Available | Negative | 1027030 - 1027470 | 16506.5 |
| m6 family metalloprotease domain-containing protein | D0N37_RS23390 | Not Available | Positive | 1027976 - 1029883 | 68973.8 |
| methyl-accepting chemotaxis protein | D0N37_RS23395 | Not Available | Positive | 1030080 - 1031378 | 47679.2 |
| is110 family transposase | D0N37_RS23400 | Not Available | Positive | 1031753 - 1032784 | 37251.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
