Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ef-hand domain-containing protein | D0N37_RS22905 | Not Available | Positive | 889464 - 889685 | 7593.85 |
| hsp20 family protein | D0N37_RS22910 | Not Available | Negative | 890763 - 891209 | 16787.0 |
| lysr substrate-binding domain-containing protein | D0N37_RS22915 | Not Available | Positive | 891460 - 891696 | 8881.98 |
| hypothetical protein | D0N37_RS24520 | Not Available | Positive | 892036 - 892194 | 5352.85 |
| tigr03643 family protein | D0N37_RS22920 | Not Available | Positive | 892255 - 892506 | 10025.0 |
| acetoacetate decarboxylase family protein | D0N37_RS22925 | Not Available | Negative | 892551 - 893471 | 33617.1 |
| gnat family n-acetyltransferase | D0N37_RS22930 | Not Available | Negative | 893701 - 894246 | 20055.7 |
| s9 family peptidase | D0N37_RS22935 | Not Available | Negative | 894305 - 896359 | 75957.2 |
| hypothetical protein | D0N37_RS22940 | Not Available | Negative | 896493 - 896798 | 11095.2 |
| lysr family transcriptional regulator | D0N37_RS22945 | Not Available | Positive | 896895 - 897029 | 4863.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
