Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS22600 | Not Available | Positive | 827337 - 827669 | 12211.7 |
| lysozyme inhibitor lpri family protein | D0N37_RS22605 | Not Available | Positive | 827666 - 828070 | 15309.2 |
| duf4386 family protein | D0N37_RS22610 | Not Available | Negative | 828145 - 828834 | 25272.4 |
| s8 family serine peptidase | D0N37_RS22615 | Not Available | Negative | 828994 - 830133 | 38508.7 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS22620 | Not Available | Positive | 830404 - 831564 | 45068.0 |
| type ii toxin-antitoxin system rele/pare family toxin | D0N37_RS22630 | Not Available | Negative | 832059 - 832346 | 10903.2 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | D0N37_RS22635 | Not Available | Negative | 832343 - 832624 | 10412.6 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS22640 | Not Available | Positive | 832796 - 832939 | 5367.51 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS25205 | Not Available | Positive | 833111 - 833314 | 7901.52 |
| inlb b-repeat-containing protein | D0N37_RS22650 | Not Available | Negative | 833692 - 835977 | 83505.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
