Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | D0N37_RS22410 | Not Available | Negative | 782020 - 782244 | 8498.25 |
| duf4177 domain-containing protein | D0N37_RS22415 | Not Available | Negative | 782237 - 782461 | 8429.39 |
| aspartate/glutamate racemase family protein | D0N37_RS22425 | Not Available | Negative | 782836 - 783552 | 25953.3 |
| pepsy-associated tm helix domain-containing protein | D0N37_RS22430 | Not Available | Negative | 783616 - 784749 | 43382.6 |
| tonb-dependent siderophore receptor | D0N37_RS22435 | Not Available | Negative | 784927 - 787032 | 78192.5 |
| helix-turn-helix transcriptional regulator | D0N37_RS22440 | Not Available | Negative | 787097 - 787939 | 31620.9 |
| s8 family serine peptidase | D0N37_RS22445 | Not Available | Negative | 788033 - 789898 | 63933.4 |
| dna-binding domain-containing protein | D0N37_RS22455 | Not Available | Negative | 790715 - 791500 | 29526.3 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS22460 | Not Available | Negative | 791493 - 792322 | 31716.8 |
| hypothetical protein | D0N37_RS22465 | Not Available | Negative | 792469 - 792918 | 14723.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
