Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | D0N37_RS22205 | Not Available | Negative | 741115 - 741744 | 23856.6 |
| phosphopentomutase | D0N37_RS22210 | Not Available | Positive | 742053 - 743264 | 43501.5 |
| purine-nucleoside phosphorylase | D0N37_RS22215 | Not Available | Positive | 743279 - 743980 | 25109.0 |
| hypothetical protein | D0N37_RS22220 | Not Available | Positive | 744175 - 745140 | 35601.8 |
| ferredoxin--nadp reductase | D0N37_RS22225 | Not Available | Positive | 745210 - 745950 | 28170.0 |
| hypothetical protein | D0N37_RS22230 | Not Available | Positive | 745895 - 746857 | 36251.0 |
| tpr end-of-group domain-containing protein | D0N37_RS22235 | Not Available | Negative | 746835 - 747713 | 33506.9 |
| substrate-binding periplasmic protein | D0N37_RS22240 | Not Available | Positive | 747791 - 748528 | 28054.1 |
| hypothetical protein | D0N37_RS22245 | Not Available | Negative | 748574 - 749158 | 21103.7 |
| histone deacetylase | D0N37_RS22250 | Not Available | Negative | 749393 - 750298 | 33585.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
