Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D0N37_RS21730 | Not Available | Positive | 637418 - 639814 | 89987.5 |
| sigma-54-dependent transcriptional regulator | D0N37_RS21735 | Not Available | Positive | 639819 - 641201 | 51213.2 |
| sensor histidine kinase | D0N37_RS21740 | Not Available | Positive | 641215 - 642117 | 34067.2 |
| atp-binding protein | D0N37_RS25145 | Not Available | Positive | 642084 - 642470 | 13587.1 |
| hypothetical protein | D0N37_RS21745 | Not Available | Positive | 642633 - 642944 | 11594.5 |
| lyse family translocator | D0N37_RS21750 | Not Available | Negative | 643043 - 643651 | 21824.5 |
| arac family transcriptional regulator | D0N37_RS21755 | Not Available | Negative | 643689 - 644516 | 31620.0 |
| is3 family transposase | D0N37_RS21765 | Not Available | Positive | 644890 - 645968 | 42093.5 |
| ggdef domain-containing protein | D0N37_RS21770 | Not Available | Negative | 646004 - 646204 | 7480.96 |
| pas domain-containing protein | D0N37_RS21775 | Not Available | Negative | 646201 - 646845 | 24344.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
