Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | D0N37_RS21665 | Not Available | Negative | 625573 - 626753 | 45283.9 |
| alcohol dehydrogenase adhp | D0N37_RS21675 | Not Available | Negative | 627194 - 628207 | 35846.6 |
| s8 family serine peptidase | D0N37_RS21680 | Not Available | Negative | 628353 - 631856 | 122342.0 |
| phytanoyl-coa dioxygenase | D0N37_RS21685 | Not Available | Positive | 632247 - 633536 | 48125.9 |
| i78 family peptidase inhibitor | D0N37_RS21700 | Not Available | Positive | 633848 - 634009 | 6219.45 |
| hypothetical protein | D0N37_RS21705 | Not Available | Positive | 634077 - 634361 | 11072.1 |
| duf1289 domain-containing protein | D0N37_RS21710 | Not Available | Positive | 634382 - 634585 | 7746.22 |
| glutathione s-transferase n-terminal domain-containing protein | D0N37_RS21715 | Not Available | Positive | 634586 - 635170 | 21315.8 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS21720 | Not Available | Positive | 635437 - 636687 | 45874.6 |
| abc transporter atp-binding protein | D0N37_RS21725 | Not Available | Positive | 636700 - 637416 | 25670.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
