Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon domain-containing protein yjdm | D0N37_RS21545 | Not Available | Positive | 604595 - 604936 | 12447.9 |
| tyrosine-type recombinase/integrase | D0N37_RS21550 | Not Available | Negative | 604966 - 605409 | 16943.4 |
| phage integrase n-terminal sam-like domain-containing protein | D0N37_RS21555 | Not Available | Negative | 605632 - 606087 | 17856.2 |
| hypothetical protein | D0N37_RS21560 | Not Available | Positive | 606481 - 608124 | 63417.5 |
| alpha/beta hydrolase | D0N37_RS21565 | Not Available | Positive | 608239 - 609246 | 37431.4 |
| alpha/beta hydrolase-fold protein | D0N37_RS21570 | Not Available | Positive | 609361 - 610521 | 44243.6 |
| transposase | D0N37_RS21575 | Not Available | Positive | 610735 - 612273 | 58400.0 |
| is3 family transposase | D0N37_RS21585 | Not Available | Negative | 612737 - 613815 | 42208.7 |
| rida family protein | D0N37_RS21595 | Not Available | Negative | 614341 - 614658 | 11692.2 |
| substrate-binding periplasmic protein | D0N37_RS21600 | Not Available | Negative | 614865 - 615590 | 27163.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
