Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mipa/ompv family protein | D0N37_RS21035 | Not Available | Negative | 492090 - 492965 | 32765.2 |
| beta-propeller domain-containing protein | D0N37_RS21040 | Not Available | Positive | 493176 - 495164 | 72454.1 |
| sensor histidine kinase | D0N37_RS21045 | Not Available | Negative | 495256 - 496509 | 46785.1 |
| response regulator transcription factor | D0N37_RS21050 | Not Available | Negative | 496509 - 497201 | 26020.3 |
| duf3019 domain-containing protein | D0N37_RS21055 | Not Available | Negative | 497210 - 497581 | 14200.2 |
| mipa/ompv family protein | D0N37_RS21060 | Not Available | Negative | 497592 - 498383 | 29075.1 |
| serine hydrolase domain-containing protein | D0N37_RS21065 | Not Available | Positive | 498630 - 499787 | 42137.9 |
| tonb-dependent receptor domain-containing protein | D0N37_RS21070 | Not Available | Negative | 499834 - 502869 | 111526.0 |
| winged helix-turn-helix domain-containing protein | D0N37_RS21075 | Not Available | Positive | 503210 - 505279 | 77320.3 |
| peroxiredoxin | D0N37_RS21080 | Not Available | Positive | 505399 - 505872 | 16584.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
