Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | D0N37_RS20985 | Not Available | Positive | 481752 - 482138 | 13819.6 |
| sodium:solute symporter family protein | D0N37_RS20990 | Not Available | Positive | 482176 - 483606 | 50211.4 |
| sugar kinase | D0N37_RS20995 | Not Available | Positive | 483603 - 484556 | 35021.5 |
| family 20 glycosylhydrolase | D0N37_RS21000 | Not Available | Positive | 484596 - 486929 | 87389.4 |
| smp-30/gluconolactonase/lre family protein | D0N37_RS21005 | Not Available | Positive | 486937 - 487836 | 32726.9 |
| hypothetical protein | D0N37_RS21010 | Not Available | Negative | 487920 - 488861 | 35404.3 |
| duf3137 domain-containing protein | D0N37_RS21015 | Not Available | Negative | 489100 - 489771 | 25059.3 |
| atp-binding protein | D0N37_RS21020 | Not Available | Negative | 489779 - 491014 | 46067.8 |
| response regulator | D0N37_RS21025 | Not Available | Negative | 491022 - 491711 | 25572.8 |
| duf3019 domain-containing protein | D0N37_RS21030 | Not Available | Negative | 491711 - 492100 | 14922.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
