Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D0N37_RS20940 | Not Available | Positive | 470202 - 470891 | 25443.6 |
| abc transporter permease | D0N37_RS20945 | Not Available | Positive | 470901 - 472232 | 49730.7 |
| abc transporter permease | D0N37_RS20950 | Not Available | Positive | 472243 - 473451 | 44309.0 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | D0N37_RS20955 | Not Available | Positive | 473532 - 473945 | 15446.7 |
| hypothetical protein | D0N37_RS20960 | Not Available | Negative | 473966 - 474325 | 13317.7 |
| tonb-dependent receptor | D0N37_RS20965 | Not Available | Positive | 474812 - 478030 | 118118.0 |
| amino acid deaminase | D0N37_RS20970 | Not Available | Positive | 478137 - 479363 | 44396.5 |
| murr/rpir family transcriptional regulator | D0N37_RS20975 | Not Available | Positive | 479377 - 480249 | 31669.3 |
| n-acyl-d-amino-acid deacylase family protein | D0N37_RS20980 | Not Available | Positive | 480249 - 481466 | 44717.7 |
| amidohydrolase family protein | D0N37_RS25110 | Not Available | Positive | 481403 - 481714 | 11537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
