Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | D0N37_RS20745 | Not Available | Negative | 424957 - 426258 | 48268.3 |
| sigma-54-dependent transcriptional regulator | D0N37_RS20750 | Not Available | Negative | 426245 - 427621 | 51433.1 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS20755 | Not Available | Positive | 427797 - 429044 | 46410.6 |
| abc transporter atp-binding protein | D0N37_RS20760 | Not Available | Positive | 429067 - 429756 | 25424.6 |
| abc transporter permease | D0N37_RS20765 | Not Available | Positive | 429749 - 432175 | 89766.0 |
| dihydrolipoyl dehydrogenase | D0N37_RS20770 | Not Available | Negative | 432220 - 433680 | 52513.1 |
| glutathione peroxidase | D0N37_RS20775 | Not Available | Negative | 433970 - 434698 | 26890.2 |
| dinb family protein | D0N37_RS20780 | Not Available | Positive | 434885 - 435418 | 20086.1 |
| hypothetical protein | D0N37_RS20785 | Not Available | Negative | 435566 - 435829 | 10306.1 |
| hypothetical protein | D0N37_RS20790 | Not Available | Negative | 436094 - 436609 | 18727.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
