Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | D0N37_RS20695 | Not Available | Negative | 411965 - 412690 | 26430.4 |
| abc transporter atp-binding protein | D0N37_RS20700 | Not Available | Negative | 412693 - 413580 | 32841.1 |
| duf2141 domain-containing protein | D0N37_RS20705 | Not Available | Negative | 413729 - 414238 | 18249.6 |
| pirin family protein | D0N37_RS20710 | Not Available | Positive | 414509 - 415336 | 30424.3 |
| glutathione s-transferase family protein | D0N37_RS20715 | Not Available | Positive | 415346 - 416329 | 38002.6 |
| atp-binding protein | D0N37_RS20720 | Not Available | Positive | 416525 - 419923 | 127067.0 |
| dj-1/pfpi family protein | D0N37_RS20725 | Not Available | Negative | 419967 - 420542 | 21217.1 |
| m3 family metallopeptidase | D0N37_RS20730 | Not Available | Positive | 420781 - 422946 | 81636.2 |
| liaf domain-containing protein | D0N37_RS20735 | Not Available | Negative | 423015 - 423692 | 25055.8 |
| manganese efflux pump mntp family protein | D0N37_RS20740 | Not Available | Negative | 424122 - 424685 | 19739.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
