Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS20645 | Not Available | Positive | 401343 - 402998 | 62926.0 |
| ig-like domain-containing protein | D0N37_RS20650 | Not Available | Negative | 403033 - 405915 | 108003.0 |
| hypothetical protein | D0N37_RS20655 | Not Available | Positive | 406135 - 406941 | 30610.7 |
| duf3325 domain-containing protein | D0N37_RS20660 | Not Available | Negative | 407290 - 407622 | 12302.5 |
| pepsy-associated tm helix domain-containing protein | D0N37_RS20665 | Not Available | Negative | 407622 - 409205 | 59357.4 |
| hypothetical protein | D0N37_RS20670 | Not Available | Negative | 409202 - 409456 | 9261.88 |
| uracil-dna glycosylase family protein | D0N37_RS20675 | Not Available | Positive | 409708 - 410274 | 21194.8 |
| hypothetical protein | D0N37_RS20680 | Not Available | Positive | 410474 - 410830 | 13074.3 |
| hypothetical protein | D0N37_RS20685 | Not Available | Negative | 410881 - 411369 | 17318.4 |
| lysr substrate-binding domain-containing protein | D0N37_RS25085 | Not Available | Positive | 411408 - 411632 | 8432.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
