Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6702 family protein | D0N37_RS20600 | Not Available | Negative | 388372 - 388860 | 18480.1 |
| m1 family metallopeptidase | D0N37_RS20605 | Not Available | Negative | 388860 - 391283 | 93572.4 |
| hypothetical protein | D0N37_RS20610 | Not Available | Positive | 391744 - 391983 | 9358.38 |
| exonuclease sbccd subunit d | D0N37_RS25075 | Not Available | Positive | 392065 - 392715 | 24403.8 |
| hypothetical protein | D0N37_RS25080 | Not Available | Positive | 392682 - 393263 | 21695.9 |
| aaa family atpase | D0N37_RS20620 | Not Available | Positive | 393268 - 396927 | 139212.0 |
| class i sam-dependent methyltransferase | D0N37_RS20625 | Not Available | Positive | 396938 - 397600 | 24307.4 |
| duf6942 family protein | D0N37_RS20630 | Not Available | Negative | 397910 - 398449 | 20464.4 |
| lipocalin family protein | D0N37_RS20635 | Not Available | Positive | 398625 - 399161 | 20630.4 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS20640 | Not Available | Positive | 399358 - 401276 | 67729.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
