Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | D0N37_RS20535 | Not Available | Negative | 378482 - 379276 | 30121.3 |
| duf3224 domain-containing protein | D0N37_RS20540 | Not Available | Positive | 379421 - 379801 | 13963.1 |
| had family hydrolase | D0N37_RS20545 | Not Available | Negative | 379821 - 380438 | 22712.5 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS20555 | Not Available | Negative | 380599 - 383099 | 90425.1 |
| abc transporter atp-binding protein | D0N37_RS20560 | Not Available | Negative | 383089 - 383802 | 25440.7 |
| arylesterase | D0N37_RS20565 | Not Available | Positive | 383801 - 384421 | 23152.2 |
| reprolysin-like metallopeptidase | D0N37_RS20570 | Not Available | Negative | 384495 - 385235 | 26164.6 |
| hypothetical protein | D0N37_RS20575 | Not Available | Negative | 385251 - 385952 | 25629.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | D0N37_RS20580 | Not Available | Negative | 386286 - 386879 | 22286.4 |
| hypothetical protein | D0N37_RS20595 | Not Available | Negative | 387374 - 388261 | 33831.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
