Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | D0N37_RS20390 | Not Available | Negative | 351148 - 352083 | 34363.3 |
| ligand-gated channel protein | D0N37_RS20395 | Not Available | Positive | 352206 - 354200 | 72978.5 |
| pepsy-associated tm helix domain-containing protein | D0N37_RS20400 | Not Available | Positive | 354200 - 355291 | 40543.9 |
| duf4198 domain-containing protein | D0N37_RS20405 | Not Available | Positive | 355294 - 356121 | 30349.8 |
| dna topoisomerase ib | D0N37_RS20415 | Not Available | Negative | 356356 - 357408 | 40519.3 |
| atp-binding cassette domain-containing protein | D0N37_RS25060 | Not Available | Negative | 357526 - 358356 | 30691.0 |
| hypothetical protein | D0N37_RS25550 | Not Available | Negative | 358431 - 358562 | 4840.82 |
| atp-binding cassette domain-containing protein | D0N37_RS25065 | Not Available | Negative | 358535 - 359059 | 19493.2 |
| duf3307 domain-containing protein | D0N37_RS20430 | Not Available | Negative | 359685 - 360440 | 28024.9 |
| hypothetical protein | D0N37_RS20435 | Not Available | Negative | 360479 - 361087 | 21991.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
