Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D0N37_RS20340 | Not Available | Positive | 342129 - 342629 | 18391.6 |
| helix-turn-helix transcriptional regulator | D0N37_RS20345 | Not Available | Positive | 342622 - 342858 | 8834.94 |
| substrate-binding periplasmic protein | D0N37_RS20350 | Not Available | Positive | 343048 - 343899 | 31584.3 |
| transcriptional regulator beti | D0N37_RS20355 | Not Available | Positive | 344199 - 344789 | 21955.4 |
| betaine-aldehyde dehydrogenase | D0N37_RS20360 | Not Available | Positive | 344791 - 346254 | 52672.7 |
| choline dehydrogenase | D0N37_RS20365 | Not Available | Positive | 346264 - 347931 | 60721.9 |
| bcct family transporter | D0N37_RS20370 | Not Available | Positive | 348083 - 349300 | 45819.5 |
| torf family putative porin | D0N37_RS20375 | Not Available | Positive | 349313 - 350014 | 26014.3 |
| voc family protein | D0N37_RS20380 | Not Available | Positive | 350115 - 350498 | 14683.3 |
| cupin domain-containing protein | D0N37_RS20385 | Not Available | Positive | 350796 - 351104 | 11572.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
