Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna recombination protein rmuc | D0N37_RS20290 | Not Available | Positive | 326888 - 328369 | 56254.0 |
| hypothetical protein | D0N37_RS20295 | Not Available | Negative | 328437 - 328922 | 18611.5 |
| tonb-dependent receptor plug domain-containing protein | D0N37_RS20300 | Not Available | Positive | 329281 - 331824 | 92376.5 |
| atp-binding protein | D0N37_RS20305 | Not Available | Negative | 331875 - 333923 | 76695.1 |
| isocitrate lyase | D0N37_RS20310 | Not Available | Negative | 334411 - 336015 | 59506.0 |
| malate synthase g | D0N37_RS20315 | Not Available | Positive | 336263 - 338440 | 80238.3 |
| cysteine hydrolase family protein | D0N37_RS20320 | Not Available | Negative | 338791 - 339306 | 18932.5 |
| dj-1/pfpi family protein | D0N37_RS20325 | Not Available | Positive | 339410 - 340072 | 24659.6 |
| is110 family transposase | D0N37_RS20330 | Not Available | Negative | 340437 - 341468 | 38970.3 |
| helix-turn-helix domain-containing protein | D0N37_RS20335 | Not Available | Positive | 341633 - 341824 | 7503.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
