Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anhydro-n-acetylmuramic acid kinase | D0N37_RS20185 | Not Available | Negative | 293046 - 294032 | 35761.6 |
| atp-dependent dna helicase recq | D0N37_RS20190 | Not Available | Negative | 294033 - 295967 | 73049.0 |
| substrate-binding periplasmic protein | D0N37_RS20195 | Not Available | Negative | 295964 - 296605 | 24515.2 |
| glycosyl hydrolase family 18 protein | D0N37_RS20200 | Not Available | Negative | 296892 - 299360 | 87490.6 |
| lytic polysaccharide monooxygenase | D0N37_RS20205 | Not Available | Negative | 299413 - 300840 | 52151.0 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS20210 | Not Available | Negative | 300887 - 303999 | 112784.0 |
| hd domain-containing phosphohydrolase | D0N37_RS20215 | Not Available | Positive | 304405 - 305727 | 49552.8 |
| fad-binding and (fe-s)-binding domain-containing protein | D0N37_RS20220 | Not Available | Negative | 305894 - 308932 | 113914.0 |
| hypothetical protein | D0N37_RS20225 | Not Available | Positive | 309072 - 309278 | 7712.91 |
| phosphoenolpyruvate synthase | D0N37_RS20230 | Not Available | Negative | 309313 - 311688 | 87041.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
