Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| basic secretory protein-like protein | D0N37_RS20140 | Not Available | Negative | 280957 - 281724 | 28956.1 |
| gh92 family glycosyl hydrolase | D0N37_RS20145 | Not Available | Negative | 281724 - 284078 | 88532.1 |
| sugar mfs transporter | D0N37_RS20150 | Not Available | Negative | 284224 - 285498 | 45400.5 |
| age family epimerase/isomerase | D0N37_RS20155 | Not Available | Positive | 285630 - 286802 | 45788.4 |
| carbohydrate kinase family protein | D0N37_RS20160 | Not Available | Positive | 286813 - 287676 | 32011.0 |
| ycgn family cysteine cluster protein | D0N37_RS20165 | Not Available | Negative | 287851 - 288345 | 18869.8 |
| sensor histidine kinase | D0N37_RS20170 | Not Available | Negative | 288869 - 290776 | 71055.4 |
| na/pi symporter | D0N37_RS20175 | Not Available | Positive | 291109 - 292248 | 39330.3 |
| hypothetical protein | D0N37_RS20180 | Not Available | Positive | 292387 - 292866 | 17651.4 |
| hypothetical protein | D0N37_RS25545 | Not Available | Negative | 292870 - 293046 | 6229.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
