Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS20090 | Not Available | Negative | 267395 - 268509 | 40733.0 |
| tonb-dependent receptor domain-containing protein | D0N37_RS20095 | Not Available | Negative | 268953 - 271640 | 99219.5 |
| hypothetical protein | D0N37_RS20100 | Not Available | Negative | 271718 - 273388 | 57815.8 |
| tetratricopeptide repeat protein | D0N37_RS20105 | Not Available | Negative | 273580 - 274890 | 49126.9 |
| energy transducer tonb | D0N37_RS20110 | Not Available | Negative | 274912 - 275517 | 21798.3 |
| exbd/tolr family protein | D0N37_RS20115 | Not Available | Negative | 275527 - 275937 | 14904.1 |
| mota/tolq/exbb proton channel family protein | D0N37_RS20120 | Not Available | Negative | 275960 - 276487 | 19323.0 |
| mota/tolq/exbb proton channel family protein | D0N37_RS20125 | Not Available | Negative | 276490 - 277857 | 49575.1 |
| duf3450 domain-containing protein | D0N37_RS20130 | Not Available | Negative | 277872 - 278621 | 27889.6 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS20135 | Not Available | Negative | 278871 - 280759 | 67758.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
