Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | D0N37_RS19995 | Not Available | Positive | 242985 - 243758 | 28216.8 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | D0N37_RS20000 | Not Available | Positive | 243755 - 244366 | 22535.1 |
| hypothetical protein | D0N37_RS20005 | Not Available | Positive | 244588 - 245088 | 18044.6 |
| glycosyltransferase family 25 protein | D0N37_RS20010 | Not Available | Positive | 245392 - 246153 | 29244.7 |
| ykva family protein | D0N37_RS20015 | Not Available | Positive | 246349 - 246897 | 20915.9 |
| m61 family metallopeptidase | D0N37_RS20020 | Not Available | Negative | 246988 - 248766 | 67762.7 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS20025 | Not Available | Positive | 248945 - 250476 | 56952.7 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS20030 | Not Available | Positive | 250578 - 251920 | 48684.4 |
| flap endonuclease xni | D0N37_RS20035 | Not Available | Positive | 251926 - 252696 | 28466.1 |
| duf3192 domain-containing protein | D0N37_RS20040 | Not Available | Positive | 252835 - 253233 | 15301.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
