Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | D0N37_RS19945 | Not Available | Negative | 232877 - 234715 | 68528.6 |
| hypothetical protein | D0N37_RS19950 | Not Available | Negative | 235050 - 235394 | 12594.0 |
| tetratricopeptide repeat protein | D0N37_RS19955 | Not Available | Positive | 235673 - 236677 | 38238.1 |
| hypothetical protein | D0N37_RS19960 | Not Available | Negative | 236771 - 237016 | 9439.01 |
| atp phosphoribosyltransferase | D0N37_RS19965 | Not Available | Positive | 237352 - 238251 | 32913.3 |
| histidinol dehydrogenase | D0N37_RS19970 | Not Available | Positive | 238256 - 239551 | 45973.1 |
| histidinol-phosphate transaminase | D0N37_RS19975 | Not Available | Positive | 239544 - 240611 | 39354.6 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | D0N37_RS19980 | Not Available | Positive | 240608 - 241669 | 38913.5 |
| imidazole glycerol phosphate synthase subunit hish | D0N37_RS19985 | Not Available | Positive | 241666 - 242256 | 21637.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | D0N37_RS19990 | Not Available | Positive | 242269 - 243003 | 26727.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
