Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | D0N37_RS19795 | Not Available | Negative | 201111 - 202034 | 34236.6 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS19800 | Not Available | Positive | 202238 - 203413 | 42219.1 |
| efflux rnd transporter permease subunit | D0N37_RS19805 | Not Available | Positive | 203416 - 206598 | 115384.0 |
| mlic family protein | D0N37_RS19810 | Not Available | Positive | 206734 - 207102 | 13813.3 |
| hypothetical protein | D0N37_RS19815 | Not Available | Negative | 207157 - 207585 | 15869.2 |
| protein translocase subunit secf | D0N37_RS19820 | Not Available | Negative | 207687 - 208598 | 33030.1 |
| protein translocase subunit secd | D0N37_RS19825 | Not Available | Negative | 208600 - 210432 | 66308.3 |
| hypothetical protein | D0N37_RS19830 | Not Available | Negative | 210570 - 211046 | 17550.9 |
| hu family dna-binding protein | D0N37_RS19835 | Not Available | Negative | 211197 - 211472 | 9387.24 |
| duf2878 family protein | D0N37_RS19840 | Not Available | Negative | 211627 - 212151 | 19552.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
