Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthase | D0N37_RS19640 | Not Available | Positive | 165962 - 167497 | 57131.1 |
| eal and hdod domain-containing protein | D0N37_RS19645 | Not Available | Positive | 167756 - 168973 | 46769.3 |
| duf418 domain-containing protein | D0N37_RS19650 | Not Available | Positive | 168973 - 170070 | 41243.8 |
| abc transporter substrate-binding protein | D0N37_RS19655 | Not Available | Positive | 170063 - 171136 | 40636.4 |
| 23s rrna pseudouridine(2604) synthase rluf | D0N37_RS19660 | Not Available | Positive | 171202 - 172188 | 36608.2 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS19665 | Not Available | Negative | 172322 - 172581 | 9549.78 |
| septum site-determining protein mind | D0N37_RS19670 | Not Available | Negative | 172583 - 173392 | 29343.4 |
| septum site-determining protein minc | D0N37_RS19675 | Not Available | Negative | 173398 - 174102 | 25460.1 |
| ycgl domain-containing protein | D0N37_RS19680 | Not Available | Positive | 174238 - 174519 | 10543.7 |
| lytic transglycosylase domain-containing protein | D0N37_RS19685 | Not Available | Positive | 174516 - 175532 | 38833.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
