Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | D0N37_RS19440 | Not Available | Positive | 119583 - 120497 | 33081.8 |
| dead/deah box helicase | D0N37_RS19445 | Not Available | Positive | 120553 - 121836 | 47709.7 |
| tpr end-of-group domain-containing protein | D0N37_RS19450 | Not Available | Positive | 122435 - 124261 | 67616.1 |
| alpha/beta hydrolase-fold protein | D0N37_RS19455 | Not Available | Positive | 124507 - 125703 | 44610.1 |
| nuclear transport factor 2 family protein | D0N37_RS19460 | Not Available | Negative | 125772 - 126203 | 16447.8 |
| hypothetical protein | D0N37_RS19465 | Not Available | Positive | 126574 - 127254 | 23751.6 |
| is110 family transposase | D0N37_RS19470 | Not Available | Negative | 127694 - 128725 | 38970.3 |
| transposase | D0N37_RS19475 | Not Available | Negative | 128997 - 129812 | 31275.9 |
| hypothetical protein | D0N37_RS19480 | Not Available | Positive | 130085 - 130324 | 8850.55 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | D0N37_RS19485 | Not Available | Positive | 130482 - 130718 | 8667.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
