Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine phosphorylase | D0N37_RS19230 | Not Available | Negative | 73337 - 74095 | 27165.5 |
| duf2189 domain-containing protein | D0N37_RS19235 | Not Available | Positive | 74263 - 75042 | 28495.9 |
| arginase family protein | D0N37_RS19240 | Not Available | Positive | 75348 - 76460 | 40751.3 |
| substrate-binding periplasmic protein | D0N37_RS19245 | Not Available | Positive | 76642 - 77352 | 27188.5 |
| vf530 family dna-binding protein | D0N37_RS19250 | Not Available | Negative | 77369 - 77611 | 9329.31 |
| duf1496 domain-containing protein | D0N37_RS19255 | Not Available | Negative | 77644 - 77925 | 10466.8 |
| tigr02647 family protein | D0N37_RS19260 | Not Available | Positive | 77986 - 78216 | 8433.19 |
| maleylacetoacetate isomerase | D0N37_RS19265 | Not Available | Negative | 78290 - 78916 | 23604.2 |
| homogentisate 1,2-dioxygenase | D0N37_RS19270 | Not Available | Negative | 78925 - 80220 | 48244.0 |
| marr family winged helix-turn-helix transcriptional regulator | D0N37_RS19275 | Not Available | Positive | 80333 - 80779 | 16988.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
