Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | D0N37_RS19135 | Not Available | Positive | 51175 - 51912 | 26342.9 |
| hemerythrin domain-containing protein | D0N37_RS19140 | Not Available | Negative | 51975 - 52409 | 16966.8 |
| hypothetical protein | D0N37_RS19145 | Not Available | Negative | 52427 - 52954 | 19452.7 |
| m4 family metallopeptidase | D0N37_RS19150 | Not Available | Positive | 53491 - 55674 | 78321.6 |
| m28 family metallopeptidase | D0N37_RS19155 | Not Available | Positive | 55802 - 57631 | 65693.7 |
| atp-binding protein | D0N37_RS19160 | Not Available | Positive | 57772 - 59493 | 64009.8 |
| sigma-54-dependent transcriptional regulator | D0N37_RS19165 | Not Available | Positive | 59486 - 60841 | 50311.8 |
| porin | D0N37_RS19170 | Not Available | Positive | 61003 - 61953 | 34814.5 |
| efflux rnd transporter periplasmic adaptor subunit | D0N37_RS19175 | Not Available | Positive | 61966 - 63413 | 52154.6 |
| aldehyde dehydrogenase family protein | D0N37_RS19180 | Not Available | Positive | 63767 - 65170 | 51939.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
