Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | D0N37_RS18885 | Not Available | Negative | 4156527 - 4157891 | 49602.4 |
| winged helix-turn-helix domain-containing protein | D0N37_RS18890 | Not Available | Positive | 4158102 - 4160282 | 82403.7 |
| tlpa family protein disulfide reductase | D0N37_RS18895 | Not Available | Negative | 4160287 - 4161024 | 28264.8 |
| tlpa family protein disulfide reductase | D0N37_RS18900 | Not Available | Negative | 4161024 - 4161482 | 17357.7 |
| cytochrome c biogenesis protein ccda | D0N37_RS18905 | Not Available | Negative | 4161500 - 4162171 | 23580.6 |
| duf1496 domain-containing protein | D0N37_RS18910 | Not Available | Positive | 4162396 - 4162611 | 7763.98 |
| membrane protein insertase yidc | D0N37_RS18915 | Not Available | Negative | 4162687 - 4164321 | 61288.0 |
| membrane protein insertion efficiency factor yidd | D0N37_RS18920 | Not Available | Negative | 4164330 - 4164632 | 11085.7 |
| ribonuclease p protein component | D0N37_RS18925 | Not Available | Negative | 4164806 - 4165240 | 16816.6 |
| 50s ribosomal protein l34 | D0N37_RS18930 | Not Available | Negative | 4165247 - 4165381 | 5151.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
