Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | D0N37_RS12440 | Not Available | Positive | 2646530 - 2647333 | 29221.6 |
| transketolase family protein | D0N37_RS12445 | Not Available | Positive | 2647330 - 2648250 | 33574.4 |
| had family hydrolase | D0N37_RS12450 | Not Available | Positive | 2648247 - 2648855 | 22627.9 |
| phosphotransferase | D0N37_RS12455 | Not Available | Positive | 2648837 - 2649841 | 37915.8 |
| zinc-binding dehydrogenase | D0N37_RS12460 | Not Available | Positive | 2649843 - 2650877 | 36806.3 |
| class i sam-dependent methyltransferase | D0N37_RS24790 | Not Available | Positive | 2650901 - 2651347 | 16736.9 |
| hypothetical protein | D0N37_RS24795 | Not Available | Positive | 2651363 - 2651623 | 9581.7 |
| formyltransferase family protein | D0N37_RS12470 | Not Available | Positive | 2651631 - 2652338 | 26996.3 |
| hypothetical protein | D0N37_RS12480 | Not Available | Positive | 2652370 - 2653677 | 49332.2 |
| hypothetical protein | D0N37_RS24800 | Not Available | Positive | 2653674 - 2653856 | 6698.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
