Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein fliq | D0N37_RS12290 | Not Available | Negative | 2616764 - 2617033 | 9752.38 |
| flagellar type iii secretion system pore protein flip | D0N37_RS12295 | Not Available | Negative | 2617035 - 2617772 | 26873.1 |
| flagellar biosynthetic protein flio | D0N37_RS12300 | Not Available | Negative | 2617765 - 2618223 | 16614.2 |
| flagellar motor switch protein flin | D0N37_RS12305 | Not Available | Negative | 2618223 - 2618621 | 14367.0 |
| flagellar motor switch protein flim | D0N37_RS12310 | Not Available | Negative | 2618694 - 2619788 | 41114.1 |
| flagellar basal body-associated protein flil | D0N37_RS12315 | Not Available | Negative | 2619799 - 2620323 | 18460.3 |
| flagellar hook-length control protein flik | D0N37_RS12320 | Not Available | Negative | 2620367 - 2622460 | 74197.0 |
| flagellar export protein flij | D0N37_RS12325 | Not Available | Negative | 2622604 - 2623050 | 17195.7 |
| flagellar protein export atpase flii | D0N37_RS12330 | Not Available | Negative | 2623050 - 2624381 | 47177.5 |
| integrase core domain-containing protein | D0N37_RS12335 | Not Available | Negative | 2624455 - 2625269 | 30700.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
