Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal and hdod domain-containing protein | D0N37_RS12145 | Not Available | Positive | 2588010 - 2589230 | 46035.5 |
| tonb-dependent receptor plug domain-containing protein | D0N37_RS12150 | Not Available | Positive | 2589320 - 2590732 | 52206.3 |
| tonb-dependent receptor domain-containing protein | D0N37_RS24780 | Not Available | Positive | 2590723 - 2591337 | 22662.7 |
| integrase core domain-containing protein | D0N37_RS12155 | Not Available | Negative | 2591385 - 2592115 | 26926.5 |
| c-type cytochrome biogenesis protein ccmi | D0N37_RS12160 | Not Available | Negative | 2592116 - 2593399 | 47623.3 |
| cytochrome c-type biogenesis protein ccmh | D0N37_RS12165 | Not Available | Negative | 2593396 - 2593860 | 17894.6 |
| redoxin family protein | D0N37_RS12170 | Not Available | Negative | 2593857 - 2594429 | 21757.3 |
| integrase core domain-containing protein | D0N37_RS12175 | Not Available | Negative | 2594431 - 2596388 | 69460.5 |
| cytochrome c maturation protein ccme | D0N37_RS12180 | Not Available | Negative | 2596390 - 2596869 | 17545.4 |
| heme exporter protein ccmd | D0N37_RS12185 | Not Available | Negative | 2596866 - 2597069 | 7396.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
