Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkd domain-containing protein | D0N37_RS12095 | Not Available | Negative | 2573970 - 2576360 | 85749.9 |
| hypothetical protein | D0N37_RS12100 | Not Available | Negative | 2576389 - 2576931 | 20111.0 |
| hypothetical protein | D0N37_RS12105 | Not Available | Negative | 2576987 - 2578933 | 71728.7 |
| hypothetical protein | D0N37_RS12110 | Not Available | Negative | 2578960 - 2579883 | 33757.0 |
| hypothetical protein | D0N37_RS12115 | Not Available | Negative | 2579914 - 2581722 | 67929.8 |
| yjih family protein | D0N37_RS12120 | Not Available | Negative | 2582290 - 2583660 | 49507.4 |
| outer membrane protein assembly factor bamc | D0N37_RS12125 | Not Available | Negative | 2583726 - 2584784 | 39829.7 |
| glycine cleavage system protein r | D0N37_RS12130 | Not Available | Positive | 2585117 - 2585650 | 19915.8 |
| thioredoxin-dependent thiol peroxidase | D0N37_RS12135 | Not Available | Positive | 2585660 - 2586133 | 17779.3 |
| sodium/proline symporter putp | D0N37_RS12140 | Not Available | Negative | 2586210 - 2587691 | 52809.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
