Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exbd/tolr family protein | D0N37_RS11995 | Not Available | Negative | 2555244 - 2555648 | 14977.2 |
| mota/tolq/exbb proton channel family protein | D0N37_RS12000 | Not Available | Negative | 2555663 - 2556187 | 19500.3 |
| mota/tolq/exbb proton channel family protein | D0N37_RS12005 | Not Available | Negative | 2556187 - 2557548 | 49287.9 |
| duf3450 domain-containing protein | D0N37_RS12010 | Not Available | Negative | 2557555 - 2558325 | 28879.4 |
| integrase core domain-containing protein | D0N37_RS25635 | Not Available | Negative | 2558729 - 2559390 | 25188.3 |
| leu/phe/val dehydrogenase | D0N37_RS12020 | Not Available | Negative | 2559422 - 2560462 | 37510.4 |
| integrase core domain-containing protein | D0N37_RS12025 | Not Available | Negative | 2560887 - 2562412 | 54879.3 |
| aminodeoxychorismate synthase component i | D0N37_RS12030 | Not Available | Positive | 2562577 - 2563926 | 50496.0 |
| coa pyrophosphatase | D0N37_RS12035 | Not Available | Positive | 2563916 - 2564476 | 20578.8 |
| l-serine ammonia-lyase | D0N37_RS12040 | Not Available | Positive | 2564645 - 2566021 | 49482.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
