Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | D0N37_RS11895 | Not Available | Negative | 2534137 - 2535141 | 36906.8 |
| thiol peroxidase | D0N37_RS11900 | Not Available | Positive | 2535343 - 2535924 | 21052.6 |
| molecular chaperone htpg | D0N37_RS11905 | Not Available | Negative | 2536003 - 2537916 | 72614.6 |
| recombination mediator recr | D0N37_RS11910 | Not Available | Negative | 2538079 - 2538678 | 21469.0 |
| m13 family metallopeptidase | D0N37_RS11915 | Not Available | Positive | 2538948 - 2541023 | 77564.3 |
| rhomboid family intramembrane serine protease | D0N37_RS11920 | Not Available | Negative | 2541074 - 2541649 | 20741.9 |
| duf3592 domain-containing protein | D0N37_RS11925 | Not Available | Negative | 2541778 - 2542449 | 24810.6 |
| is5 family transposase | D0N37_RS11930 | Not Available | Negative | 2542544 - 2543833 | 49296.2 |
| amidohydrolase family protein | D0N37_RS11935 | Not Available | Positive | 2544052 - 2544573 | 19303.1 |
| ybab/ebfc family nucleoid-associated protein | D0N37_RS11940 | Not Available | Negative | 2544699 - 2545025 | 11992.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
