Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| card1-like endonuclease domain-containing protein | D0N37_RS11795 | Not Available | Positive | 2506898 - 2508052 | 43479.8 |
| hypothetical protein | D0N37_RS24775 | Not Available | Positive | 2508381 - 2508647 | 9834.52 |
| Tmrna,resume consensus sequence (at 85): agtaatcgcaaacgacga | Not Available | Not Available | Positive | 2508855 - 2509211 | Not Available |
| chase domain-containing protein | D0N37_RS11810 | Not Available | Positive | 2509541 - 2512249 | 100726.0 |
| substrate-binding periplasmic protein | D0N37_RS11815 | Not Available | Positive | 2512376 - 2513161 | 29369.5 |
| tetratricopeptide repeat protein | D0N37_RS11820 | Not Available | Positive | 2513274 - 2514287 | 38698.5 |
| nucleotide exchange factor grpe | D0N37_RS11825 | Not Available | Negative | 2514350 - 2514967 | 22611.4 |
| hrca family transcriptional regulator | D0N37_RS11830 | Not Available | Negative | 2515033 - 2515968 | 34961.1 |
| integrase core domain-containing protein | D0N37_RS11835 | Not Available | Positive | 2516059 - 2516942 | 31440.6 |
| hypothetical protein | D0N37_RS11840 | Not Available | Positive | 2517005 - 2517586 | 21730.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
