Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol oxidase subunit ii | D0N37_RS11685 | Not Available | Negative | 2480911 - 2481819 | 33599.6 |
| hypothetical protein | D0N37_RS11690 | Not Available | Negative | 2482133 - 2482564 | 15668.3 |
| flavodoxin family protein | D0N37_RS11700 | Not Available | Negative | 2483241 - 2483696 | 17723.2 |
| redox-sensitive transcriptional activator soxr | D0N37_RS11705 | Not Available | Positive | 2483778 - 2484284 | 19046.8 |
| duf885 domain-containing protein | D0N37_RS11710 | Not Available | Positive | 2484298 - 2486082 | 68068.9 |
| s46 family peptidase | D0N37_RS11715 | Not Available | Negative | 2486229 - 2488388 | 80868.9 |
| hypothetical protein | D0N37_RS11720 | Not Available | Negative | 2488540 - 2489067 | 19493.1 |
| hypothetical protein | D0N37_RS11725 | Not Available | Negative | 2489138 - 2489668 | 19876.6 |
| t6ss phospholipase effector tle1-like catalytic domain-containing protein | D0N37_RS11730 | Not Available | Negative | 2489665 - 2491731 | 77170.6 |
| abc-f family atpase | D0N37_RS11735 | Not Available | Positive | 2491979 - 2493574 | 60258.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
