Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ion channel | D0N37_RS11485 | Not Available | Positive | 2437157 - 2438137 | 37328.0 |
| hd domain-containing protein | D0N37_RS11490 | Not Available | Negative | 2438155 - 2438796 | 23523.2 |
| class i sam-dependent methyltransferase | D0N37_RS11495 | Not Available | Positive | 2438924 - 2440114 | 44030.1 |
| pilz domain-containing protein | D0N37_RS11500 | Not Available | Negative | 2440176 - 2440466 | 10579.5 |
| pled family two-component system response regulator | D0N37_RS11505 | Not Available | Negative | 2440476 - 2440859 | 14012.8 |
| atp-dependent rna helicase hrpa | D0N37_RS11510 | Not Available | Negative | 2440941 - 2444834 | 146192.0 |
| cbs domain-containing protein | D0N37_RS11515 | Not Available | Negative | 2444988 - 2445416 | 15911.2 |
| integrase core domain-containing protein | D0N37_RS11520 | Not Available | Negative | 2445502 - 2446529 | 36799.8 |
| hypothetical protein | D0N37_RS11525 | Not Available | Positive | 2446783 - 2447256 | 18366.3 |
| sapc family protein | D0N37_RS11530 | Not Available | Negative | 2447386 - 2448096 | 26694.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
