Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | D0N37_RS11180 | Not Available | Negative | 2380218 - 2381732 | 55866.8 |
| integration host factor subunit alpha | D0N37_RS11185 | Not Available | Negative | 2381843 - 2382142 | 11141.4 |
| phenylalanine--trna ligase subunit beta | D0N37_RS11190 | Not Available | Negative | 2382145 - 2384532 | 86841.8 |
| phenylalanine--trna ligase subunit alpha | D0N37_RS11195 | Not Available | Negative | 2384546 - 2385526 | 36864.1 |
| dnaa inactivator hda | D0N37_RS11200 | Not Available | Negative | 2385610 - 2386314 | 26101.7 |
| duf2066 domain-containing protein | D0N37_RS11205 | Not Available | Negative | 2386316 - 2387377 | 40754.6 |
| sensor domain-containing diguanylate cyclase | D0N37_RS11210 | Not Available | Negative | 2387501 - 2388673 | 44540.0 |
| voc family protein | D0N37_RS11215 | Not Available | Positive | 2388852 - 2389292 | 16679.8 |
| transporter substrate-binding domain-containing protein | D0N37_RS11220 | Not Available | Negative | 2389359 - 2390111 | 29217.3 |
| collagenase | D0N37_RS11225 | Not Available | Negative | 2390335 - 2393133 | 102175.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
