Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopenicillin n synthase family dioxygenase | D0N37_RS11080 | Not Available | Negative | 2349947 - 2350789 | 31893.7 |
| hybrid sensor histidine kinase/response regulator | D0N37_RS11085 | Not Available | Negative | 2351177 - 2352298 | 40485.6 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | D0N37_RS11090 | Not Available | Positive | 2352404 - 2356135 | 137549.0 |
| duf3334 family protein | D0N37_RS11095 | Not Available | Negative | 2356261 - 2356935 | 25084.9 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | D0N37_RS11100 | Not Available | Positive | 2357051 - 2357776 | 26964.3 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | D0N37_RS11105 | Not Available | Positive | 2357785 - 2358753 | 37149.6 |
| hypothetical protein | D0N37_RS11110 | Not Available | Negative | 2358819 - 2359010 | 6676.14 |
| adenylate kinase | D0N37_RS11115 | Not Available | Negative | 2359250 - 2359894 | 23433.1 |
| type i glyceraldehyde-3-phosphate dehydrogenase | D0N37_RS11120 | Not Available | Negative | 2360063 - 2361067 | 35870.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | D0N37_RS11125 | Not Available | Negative | 2361085 - 2361705 | 21263.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
