Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4136 domain-containing protein | D0N37_RS11030 | Not Available | Positive | 2340117 - 2340668 | 20937.6 |
| integrase core domain-containing protein | D0N37_RS11035 | Not Available | Negative | 2340849 - 2341916 | 39917.1 |
| hypothetical protein | D0N37_RS11040 | Not Available | Negative | 2342073 - 2342360 | 10317.7 |
| hypothetical protein | D0N37_RS11045 | Not Available | Negative | 2342406 - 2342633 | 8882.2 |
| cystathionine beta-lyase | D0N37_RS11050 | Not Available | Negative | 2342900 - 2344078 | 43471.2 |
| nad(+) diphosphatase | D0N37_RS11055 | Not Available | Negative | 2344081 - 2344986 | 34312.4 |
| glucosamine-6-phosphate deaminase | D0N37_RS11060 | Not Available | Negative | 2345134 - 2345928 | 28700.2 |
| integrase core domain-containing protein | D0N37_RS11065 | Not Available | Negative | 2346191 - 2347323 | 41047.2 |
| integrase core domain-containing protein | D0N37_RS11070 | Not Available | Negative | 2347583 - 2348706 | 40030.7 |
| n-acetylglucosamine kinase | D0N37_RS11075 | Not Available | Negative | 2348706 - 2349617 | 32125.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
