Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 glutamine amidotransferase domain-containing protein | D0N37_RS10875 | Not Available | Negative | 2304583 - 2305716 | 40817.1 |
| duf6058 family natural product biosynthesis protein | D0N37_RS10880 | Not Available | Negative | 2305867 - 2306511 | 24477.2 |
| alpha/beta fold hydrolase | D0N37_RS10890 | Not Available | Negative | 2306967 - 2307809 | 31631.8 |
| calcium/sodium antiporter | D0N37_RS10895 | Not Available | Negative | 2307901 - 2308851 | 33132.5 |
| biosynthetic arginine decarboxylase | D0N37_RS10900 | Not Available | Positive | 2309122 - 2311035 | 71040.6 |
| agmatinase | D0N37_RS10905 | Not Available | Positive | 2311039 - 2311959 | 33720.3 |
| marr family winged helix-turn-helix transcriptional regulator | D0N37_RS10910 | Not Available | Negative | 2312798 - 2313280 | 18195.3 |
| integrase core domain-containing protein | D0N37_RS10915 | Not Available | Positive | 2313397 - 2314295 | 32253.3 |
| gnat family n-acetyltransferase | D0N37_RS10920 | Not Available | Negative | 2314436 - 2314858 | 15620.6 |
| integrase core domain-containing protein | D0N37_RS10925 | Not Available | Negative | 2314886 - 2315191 | 11417.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
