Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-acylating methylmalonate-semialdehyde dehydrogenase | D0N37_RS10730 | Not Available | Negative | 2270932 - 2272422 | 54537.1 |
| thiolase family protein | D0N37_RS10735 | Not Available | Negative | 2272519 - 2273697 | 40409.6 |
| merr family transcriptional regulator | D0N37_RS10740 | Not Available | Positive | 2274013 - 2274405 | 15356.6 |
| isovaleryl-coa dehydrogenase | D0N37_RS10745 | Not Available | Positive | 2274430 - 2275605 | 42652.1 |
| carboxyl transferase domain-containing protein | D0N37_RS10750 | Not Available | Positive | 2275615 - 2277222 | 58017.6 |
| enoyl-coa hydratase-related protein | D0N37_RS10755 | Not Available | Positive | 2277232 - 2278014 | 28152.9 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | D0N37_RS10760 | Not Available | Positive | 2278023 - 2279966 | 70535.1 |
| hydroxymethylglutaryl-coa lyase | D0N37_RS10765 | Not Available | Positive | 2279966 - 2280874 | 32151.8 |
| coa transferase subunit a | D0N37_RS10770 | Not Available | Positive | 2280902 - 2281600 | 25150.3 |
| coa transferase subunit b | D0N37_RS10775 | Not Available | Positive | 2281610 - 2282275 | 23445.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
