Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease adapter clps | D0N37_RS10630 | Not Available | Negative | 2251490 - 2251807 | 12014.2 |
| cold shock domain-containing protein cspd | D0N37_RS10635 | Not Available | Positive | 2252007 - 2252225 | 7852.27 |
| nadp-dependent isocitrate dehydrogenase | D0N37_RS10640 | Not Available | Positive | 2252719 - 2254938 | 80389.1 |
| pseudouridine synthase | D0N37_RS10645 | Not Available | Positive | 2255050 - 2255718 | 25167.2 |
| trna 2-thiouridine(34) synthase mnma | D0N37_RS10650 | Not Available | Positive | 2255833 - 2256933 | 40919.4 |
| high frequency lysogenization protein hfld | D0N37_RS10655 | Not Available | Positive | 2256933 - 2257535 | 22526.7 |
| adenylosuccinate lyase | D0N37_RS10660 | Not Available | Positive | 2257764 - 2259134 | 51310.1 |
| cupin domain-containing protein | D0N37_RS10665 | Not Available | Positive | 2259222 - 2260409 | 44936.6 |
| gnat family n-acetyltransferase | D0N37_RS10670 | Not Available | Positive | 2260543 - 2261001 | 17459.2 |
| duf4826 family protein | D0N37_RS10675 | Not Available | Negative | 2260985 - 2261434 | 17126.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
