Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase core domain-containing protein | D0N37_RS10425 | Not Available | Negative | 2202978 - 2205961 | 105582.0 |
| ygjv family protein | D0N37_RS10430 | Not Available | Negative | 2206288 - 2206797 | 18899.1 |
| atp-binding protein | D0N37_RS10435 | Not Available | Negative | 2206856 - 2210548 | 138921.0 |
| alkaline phosphatase d family protein | D0N37_RS10440 | Not Available | Negative | 2210712 - 2212550 | 70132.9 |
| tatd family hydrolase | D0N37_RS10445 | Not Available | Negative | 2212534 - 2213328 | 29656.3 |
| pilz domain-containing protein | D0N37_RS10450 | Not Available | Negative | 2213336 - 2213659 | 11783.1 |
| dna polymerase iii subunit delta' | D0N37_RS10455 | Not Available | Negative | 2213671 - 2214579 | 33304.9 |
| dtmp kinase | D0N37_RS10460 | Not Available | Negative | 2214572 - 2215225 | 24034.0 |
| extracellular solute-binding protein | D0N37_RS10465 | Not Available | Positive | 2215463 - 2216650 | 44779.1 |
| atp-binding protein | D0N37_RS10470 | Not Available | Positive | 2216625 - 2218775 | 80491.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
