Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | strain DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | D0N37_RS10375 | Not Available | Negative | 2193019 - 2193348 | 12091.9 |
| integron integrase | D0N37_RS10380 | Not Available | Positive | 2193756 - 2194715 | 36639.3 |
| hypothetical protein | D0N37_RS10385 | Not Available | Negative | 2194954 - 2195157 | 7670.96 |
| is110 family transposase | D0N37_RS10390 | Not Available | Negative | 2195525 - 2196556 | 38970.3 |
| transposase | D0N37_RS10395 | Not Available | Positive | 2196712 - 2197683 | 37572.4 |
| is3 family transposase | D0N37_RS10400 | Not Available | Negative | 2197767 - 2198845 | 42093.5 |
| hypothetical protein | D0N37_RS10405 | Not Available | Positive | 2199158 - 2200012 | 32820.8 |
| hypothetical protein | D0N37_RS10410 | Not Available | Negative | 2200553 - 2200810 | 9879.74 |
| ornithine cyclodeaminase family protein | D0N37_RS10415 | Not Available | Negative | 2200791 - 2201735 | 34524.0 |
| m24 family metallopeptidase | D0N37_RS10420 | Not Available | Negative | 2201745 - 2202833 | 40112.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
